origdir = ../tarballs
/home/sw/bin/buildPackage: line 17: .svn/deb-layout: No such file or directory
Complete layout information:
	buildArea=/sw/debian-med/trunk/packages/boxshade/build-area
	origDir=/sw/debian-med/trunk/packages/boxshade/tarballs
	tagsDir=/sw/debian-med/trunk/packages/boxshade/tags
	tagsUrl=svn://svn.debian.org/svn/debian-med/trunk/packages/boxshade/tags
	trunkDir=/sw/debian-med/trunk/packages/boxshade/trunk
	trunkUrl=svn://svn.debian.org/svn/debian-med/trunk/packages/boxshade/trunk
mergeWithUpstream mode detected, looking for /sw/debian-med/trunk/packages/boxshade/tarballs/boxshade_3.3.1.orig.tar.gz
I: mergeWithUpstream property set, looking for upstream source tarball...
 tar --no-same-owner --no-same-permissions --extract --gzip --file /sw/debian-med/trunk/packages/boxshade/tarballs/boxshade_3.3.1.orig.tar.gz --directory <1 more argument>
 mv /sw/debian-med/trunk/packages/boxshade/build-area/tmp-0.991080310735018/boxshade-3.3.1 /sw/debian-med/trunk/packages/boxshade/build-area/boxshade-3.3.1
 mkdir -p /sw/debian-med/trunk/packages/boxshade/build-area/boxshade-3.3.1/debian/patches /sw/debian-med/trunk/packages/boxshade/build-area/boxshade-3.3.1/debian/bin <3 more arguments>
 cp --parents -laf debian/tests/control debian/output.txt debian/bin/boxshade debian/boxshade.1.xml debian/manpages debian/copyright debian/input.msf debian/README.Debian <17 more arguments>
rm -rf /sw/debian-med/trunk/packages/boxshade/build-area/tmp-0.991080310735018
chmod -R u+r+w+X,g+r-w+X,o+r-w+X -- /sw/debian-med/trunk/packages/boxshade/build-area/boxshade-3.3.1
 /bin/sh -c pdebuild --buildresult /sw/packages/build-area -- --basetgz /var/cache/pbuilder/base-sid-amd64.tgz --architecture amd64 --distribution sid  
W: /home/sw/.pbuilderrc does not exist
dpkg-buildpackage: source package boxshade
dpkg-buildpackage: source version 3.3.1-8~experimental1
dpkg-buildpackage: source changed by Charles Plessy <plessy@debian.org>
 dpkg-source --before-build boxshade-3.3.1
dpkg-source: info: applying kickOutGets.patch
dpkg-source: info: applying remove-newlines.patch
 fakeroot debian/rules clean
dh clean
   dh_testdir
   dh_auto_clean
   debian/rules override_dh_clean
make[1]: Entering directory `/sw/debian-med/trunk/packages/boxshade/build-area/boxshade-3.3.1'
rm -f boxshade *.o
dh_clean
	rm -f debian/boxshade.substvars
	rm -f debian/boxshade.*.debhelper
	rm -rf debian/boxshade/
	rm -f debian/*.debhelper.log
	rm -f debian/files
	find .  \( \( -type f -a \
	        \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
		 -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
		 -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
		 -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
		\) -exec rm -f {} \; \) -o \
		\( -type d -a -name autom4te.cache -prune -exec rm -rf {} \; \) \)
	rm -f *-stamp
make[1]: Leaving directory `/sw/debian-med/trunk/packages/boxshade/build-area/boxshade-3.3.1'
 dpkg-source -b boxshade-3.3.1
dpkg-source: info: using source format `3.0 (quilt)'
dpkg-source: info: building boxshade using existing ./boxshade_3.3.1.orig.tar.gz
dpkg-source: info: building boxshade in boxshade_3.3.1-8~experimental1.debian.tar.gz
dpkg-source: info: building boxshade in boxshade_3.3.1-8~experimental1.dsc
 dpkg-genchanges -S >../boxshade_3.3.1-8~experimental1_source.changes
dpkg-genchanges: not including original source code in upload
 dpkg-source --after-build boxshade-3.3.1
dpkg-source: info: unapplying remove-newlines.patch
dpkg-source: info: unapplying kickOutGets.patch
dpkg-buildpackage: binary and diff upload (original source NOT included)
W: /home/sw/.pbuilderrc does not exist
I: using fakeroot in build.
I: Current time: Tue Mar 26 12:41:29 CET 2013
I: pbuilder-time-stamp: 1364298089
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/base-sid-amd64.tgz]
I: creating local configuration
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /run/shm filesystem
I: mounting /dev/pts filesystem
I: policy-rc.d already exists
I: Obtaining the cached apt archive contents
I: Installing the build-deps
 -> Attempting to satisfy build-dependencies
 -> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: amd64
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
 This package was created automatically by pbuilder to satisfy the
 build-dependencies of the package being currently built.
Depends: debhelper (>= 9)
dpkg-deb: building package `pbuilder-satisfydepends-dummy' in `/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 12010 files and directories currently installed.)
Unpacking pbuilder-satisfydepends-dummy (from .../pbuilder-satisfydepends-dummy.deb) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
 pbuilder-satisfydepends-dummy depends on debhelper (>= 9); however:
  Package debhelper is not installed.

Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
The following NEW packages will be installed:
  bsdmainutils{a} debhelper{a} file{a} gettext{a} gettext-base{a} 
  groff-base{a} html2text{a} intltool-debian{a} libasprintf-dev{a} 
  libasprintf0c2{a} libcroco3{a} libffi5{a} libgettextpo-dev{a} 
  libgettextpo0{a} libglib2.0-0{a} libmagic1{a} libpcre3{a} libpipeline1{a} 
  libunistring0{a} libxml2{a} man-db{a} po-debconf{a} 
0 packages upgraded, 22 newly installed, 0 to remove and 0 not upgraded.
Need to get 0 B/9143 kB of archives. After unpacking 26.0 MB will be used.
Writing extended state information...
debconf: delaying package configuration, since apt-utils is not installed
Selecting previously unselected package libpipeline1:amd64.
(Reading database ... 12010 files and directories currently installed.)
Unpacking libpipeline1:amd64 (from .../libpipeline1_1.2.2-2_amd64.deb) ...
Selecting previously unselected package groff-base.
Unpacking groff-base (from .../groff-base_1.22.2-1_amd64.deb) ...
Selecting previously unselected package bsdmainutils.
Unpacking bsdmainutils (from .../bsdmainutils_9.0.4_amd64.deb) ...
Selecting previously unselected package man-db.
Unpacking man-db (from .../man-db_2.6.3-3_amd64.deb) ...
Selecting previously unselected package libasprintf0c2:amd64.
Unpacking libasprintf0c2:amd64 (from .../libasprintf0c2_0.18.1.1-10_amd64.deb) ...
Selecting previously unselected package libmagic1:amd64.
Unpacking libmagic1:amd64 (from .../libmagic1_1%3a5.11-2.1_amd64.deb) ...
Selecting previously unselected package libpcre3:amd64.
Unpacking libpcre3:amd64 (from .../libpcre3_1%3a8.31-2_amd64.deb) ...
Selecting previously unselected package libxml2:amd64.
Unpacking libxml2:amd64 (from .../libxml2_2.8.0+dfsg1-7+nmu1_amd64.deb) ...
Selecting previously unselected package libffi5:amd64.
Unpacking libffi5:amd64 (from .../libffi5_3.0.10-3_amd64.deb) ...
Selecting previously unselected package libglib2.0-0:amd64.
Unpacking libglib2.0-0:amd64 (from .../libglib2.0-0_2.33.12+really2.32.4-5_amd64.deb) ...
Selecting previously unselected package libcroco3:amd64.
Unpacking libcroco3:amd64 (from .../libcroco3_0.6.6-2_amd64.deb) ...
Selecting previously unselected package libunistring0:amd64.
Unpacking libunistring0:amd64 (from .../libunistring0_0.9.3-5_amd64.deb) ...
Selecting previously unselected package libgettextpo0:amd64.
Unpacking libgettextpo0:amd64 (from .../libgettextpo0_0.18.1.1-10_amd64.deb) ...
Selecting previously unselected package file.
Unpacking file (from .../file_1%3a5.11-2.1_amd64.deb) ...
Selecting previously unselected package gettext-base.
Unpacking gettext-base (from .../gettext-base_0.18.1.1-10_amd64.deb) ...
Selecting previously unselected package html2text.
Unpacking html2text (from .../html2text_1.3.2a-15_amd64.deb) ...
Selecting previously unselected package libasprintf-dev:amd64.
Unpacking libasprintf-dev:amd64 (from .../libasprintf-dev_0.18.1.1-10_amd64.deb) ...
Selecting previously unselected package libgettextpo-dev:amd64.
Unpacking libgettextpo-dev:amd64 (from .../libgettextpo-dev_0.18.1.1-10_amd64.deb) ...
Selecting previously unselected package gettext.
Unpacking gettext (from .../gettext_0.18.1.1-10_amd64.deb) ...
Selecting previously unselected package intltool-debian.
Unpacking intltool-debian (from .../intltool-debian_0.35.0+20060710.1_all.deb) ...
Selecting previously unselected package po-debconf.
Unpacking po-debconf (from .../po-debconf_1.0.16+nmu2_all.deb) ...
Selecting previously unselected package debhelper.
Unpacking debhelper (from .../debhelper_9.20120909_all.deb) ...
Setting up libpipeline1:amd64 (1.2.2-2) ...
Setting up groff-base (1.22.2-1) ...
Setting up bsdmainutils (9.0.4) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up man-db (2.6.3-3) ...
Building database of manual pages ...
Setting up libasprintf0c2:amd64 (0.18.1.1-10) ...
Setting up libmagic1:amd64 (1:5.11-2.1) ...
Setting up libpcre3:amd64 (1:8.31-2) ...
Setting up libxml2:amd64 (2.8.0+dfsg1-7+nmu1) ...
Setting up libffi5:amd64 (3.0.10-3) ...
Setting up libglib2.0-0:amd64 (2.33.12+really2.32.4-5) ...
No schema files found: doing nothing.
Setting up libcroco3:amd64 (0.6.6-2) ...
Setting up libunistring0:amd64 (0.9.3-5) ...
Setting up libgettextpo0:amd64 (0.18.1.1-10) ...
Setting up file (1:5.11-2.1) ...
Setting up gettext-base (0.18.1.1-10) ...
Setting up html2text (1.3.2a-15) ...
Setting up libasprintf-dev:amd64 (0.18.1.1-10) ...
Setting up libgettextpo-dev:amd64 (0.18.1.1-10) ...
Setting up gettext (0.18.1.1-10) ...
Setting up intltool-debian (0.35.0+20060710.1) ...
Setting up po-debconf (1.0.16+nmu2) ...
Setting up debhelper (9.20120909) ...
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
 -> Finished parsing the build-deps
Reading package lists...
Building dependency tree...
Reading state information...
The following NEW packages will be installed:
  fakeroot
debconf: delaying package configuration, since apt-utils is not installed
0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded.
Need to get 0 B/109 kB of archives.
After this operation, 325 kB of additional disk space will be used.
Selecting previously unselected package fakeroot.
(Reading database ... 13412 files and directories currently installed.)
Unpacking fakeroot (from .../fakeroot_1.18.4-2_amd64.deb) ...
Processing triggers for man-db ...
Setting up fakeroot (1.18.4-2) ...
update-alternatives: using /usr/bin/fakeroot-sysv to provide /usr/bin/fakeroot (fakeroot) in auto mode
I: Copying back the cached apt archive contents
I: Copying source file
I: copying [../boxshade_3.3.1-8~experimental1.dsc]
I: copying [../boxshade_3.3.1.orig.tar.gz]
I: copying [../boxshade_3.3.1-8~experimental1.debian.tar.gz]
I: Extracting source
dpkg-source: warning: extracting unsigned source package (boxshade_3.3.1-8~experimental1.dsc)
dpkg-source: info: extracting boxshade in boxshade-3.3.1
dpkg-source: info: unpacking boxshade_3.3.1.orig.tar.gz
dpkg-source: info: unpacking boxshade_3.3.1-8~experimental1.debian.tar.gz
dpkg-source: info: applying kickOutGets.patch
dpkg-source: info: applying remove-newlines.patch
I: Building the package
I: Running cd tmp/buildd/*/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin" dpkg-buildpackage -us -uc  -rfakeroot
dpkg-buildpackage: source package boxshade
dpkg-buildpackage: source version 3.3.1-8~experimental1
dpkg-buildpackage: source changed by Charles Plessy <plessy@debian.org>
 dpkg-source --before-build boxshade-3.3.1
dpkg-buildpackage: host architecture amd64
 fakeroot debian/rules clean
dh clean
   dh_testdir
   dh_auto_clean
   debian/rules override_dh_clean
make[1]: Entering directory `/tmp/buildd/boxshade-3.3.1'
rm -f boxshade *.o
dh_clean
	rm -f debian/boxshade.substvars
	rm -f debian/boxshade.*.debhelper
	rm -rf debian/boxshade/
	rm -f debian/*.debhelper.log
	rm -f debian/files
	find .  \( \( -type f -a \
	        \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \
		 -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \
		 -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \
		 -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \
		\) -exec rm -f {} \; \) -o \
		\( -type d -a -name autom4te.cache -prune -exec rm -rf {} \; \) \)
	rm -f *-stamp
make[1]: Leaving directory `/tmp/buildd/boxshade-3.3.1'
 dpkg-source -b boxshade-3.3.1
dpkg-source: info: using source format `3.0 (quilt)'
dpkg-source: info: building boxshade using existing ./boxshade_3.3.1.orig.tar.gz
dpkg-source: info: building boxshade in boxshade_3.3.1-8~experimental1.debian.tar.gz
dpkg-source: info: building boxshade in boxshade_3.3.1-8~experimental1.dsc
 debian/rules build
dh build
   dh_testdir
   dh_auto_configure
   debian/rules override_dh_auto_build
make[1]: Entering directory `/tmp/buildd/boxshade-3.3.1'
/usr/bin/make -f makefile.unx CFLAGS="-g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security" CPPFLAGS="-D_FORTIFY_SOURCE=2" LDFLAGS="-Wl,-z,relro"
make[2]: Entering directory `/tmp/buildd/boxshade-3.3.1'
gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2  -c -o box.o box.c
box.c: In function 'ask':
box.c:532:7: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long unsigned int' [-Wformat]
box.c:441:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
box.c:453:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
box.c:497:11: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2  -c -o bx_read.o bx_read.c
bx_read.c: In function 'read_file_phylip':
bx_read.c:451:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
bx_read.c: In function 'read_file_esee':
bx_read.c:401:8: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
bx_read.c:402:8: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
bx_read.c:404:8: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
bx_read.c:407:10: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
bx_read.c:409:10: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
bx_read.c:412:12: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
bx_read.c:415:10: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
bx_read.c:418:10: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
bx_read.c:423:12: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
bx_read.c:428:12: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
bx_read.c:430:12: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
bx_read.c:431:10: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
bx_read.c:432:10: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
bx_read.c:433:10: warning: ignoring return value of 'fread', declared with attribute warn_unused_result [-Wunused-result]
bx_read.c: In function 'read_file_maligned':
bx_read.c:372:11: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
bx_read.c: In function 'Gets':
bx_read.c:7:8: warning: ignoring return value of 'fgets', declared with attribute warn_unused_result [-Wunused-result]
gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2  -c -o bx_misc.o bx_misc.c
gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2  -c -o dv_ansi.o dv_ansi.c
dv_ansi.c: In function 'VTnewpage':
dv_ansi.c:131:8: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2  -c -o dv_ascii.o dv_ascii.c
gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2  -c -o dv_crt.o dv_crt.c
gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2  -c -o dv_fig.o dv_fig.c
dv_fig.c: In function 'ask_fig':
dv_fig.c:143:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
dv_fig.c:145:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2  -c -o dv_hpgl.o dv_hpgl.c
dv_hpgl.c: In function 'ask_hpgl':
dv_hpgl.c:246:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2  -c -o dv_lj250.o dv_lj250.c
gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2  -c -o dv_pict.o dv_pict.c
dv_pict.c: In function 'ask_pict':
dv_pict.c:176:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2  -c -o dv_ps.o dv_ps.c
dv_ps.c: In function 'ask':
dv_ps.c:180:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2  -c -o dv_regis.o dv_regis.c
dv_regis.c: In function 'RTnewpage':
dv_regis.c:179:8: warning: ignoring return value of 'scanf', declared with attribute warn_unused_result [-Wunused-result]
gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2  -c -o dv_rtf.o dv_rtf.c
dv_rtf.c: In function 'ask_rtf':
dv_rtf.c:118:9: warning: ignoring return value of 'fscanf', declared with attribute warn_unused_result [-Wunused-result]
gcc -g -O2 -fstack-protector --param=ssp-buffer-size=4 -Wformat -Werror=format-security -D_FORTIFY_SOURCE=2  -c -o dv_html.o dv_html.c
gcc -Wl,-z,relro -o boxshade box.o bx_read.o bx_misc.o dv_ansi.o dv_ascii.o dv_crt.o dv_fig.o dv_hpgl.o dv_lj250.o dv_pict.o dv_ps.o dv_regis.o dv_rtf.o dv_html.o -lm
make[2]: Leaving directory `/tmp/buildd/boxshade-3.3.1'
make[1]: Leaving directory `/tmp/buildd/boxshade-3.3.1'
   dh_auto_test
 fakeroot debian/rules binary
dh binary
   dh_testroot
   dh_prep
	rm -f debian/boxshade.substvars
	rm -f debian/boxshade.*.debhelper
	rm -rf debian/boxshade/
   dh_installdirs
	install -d debian/boxshade
   dh_auto_install
   dh_install
	install -d debian/boxshade/usr
	cp -a ./debian/bin debian/boxshade/usr/
	install -d debian/boxshade/usr/lib/boxshade
	cp -a ./boxshade debian/boxshade/usr/lib/boxshade/
	install -d debian/boxshade/etc/boxshade
	cp -a ./box_dna.grp debian/boxshade/etc/boxshade/
	cp -a ./box_pep.grp debian/boxshade/etc/boxshade/
	cp -a ./clust160.grp debian/boxshade/etc/boxshade/
	cp -a ./positive.grp debian/boxshade/etc/boxshade/
	cp -a ./strong.grp debian/boxshade/etc/boxshade/
	cp -a ./box_dna.par debian/boxshade/etc/boxshade/
	cp -a ./box_pep.par debian/boxshade/etc/boxshade/
	cp -a ./box_dna.sim debian/boxshade/etc/boxshade/
	cp -a ./box_pep.sim debian/boxshade/etc/boxshade/
	cp -a ./clust160.sim debian/boxshade/etc/boxshade/
	cp -a ./positive.sim debian/boxshade/etc/boxshade/
	cp -a ./strong.sim debian/boxshade/etc/boxshade/
   dh_installdocs
	install -g 0 -o 0 -d debian/boxshade/usr/share/doc/boxshade
	install -g 0 -o 0 -m 644 -p debian/README.Debian debian/boxshade/usr/share/doc/boxshade/README.Debian
	install -g 0 -o 0 -m 644 -p debian/copyright debian/boxshade/usr/share/doc/boxshade/copyright
   dh_installchangelogs
	install -o 0 -g 0 -p -m644 debian/changelog debian/boxshade/usr/share/doc/boxshade/changelog.Debian
   dh_installexamples
	install -d debian/boxshade/usr/share/doc/boxshade/examples
	cp -a debian/input.aln debian/boxshade/usr/share/doc/boxshade/examples
	cp -a debian/input.msf debian/boxshade/usr/share/doc/boxshade/examples
	cp -a debian/output.txt debian/boxshade/usr/share/doc/boxshade/examples
	cp -a debian/tests/test-with-example-data debian/boxshade/usr/share/doc/boxshade/examples
   dh_installman
	install -d debian/boxshade/usr/share/man/man1/
	install -p -m644 debian/boxshade.1 debian/boxshade/usr/share/man/man1/boxshade.1
	man --recode UTF-8 ./boxshade\.1 > boxshade\.1\.new
	chmod 644 boxshade.1.new
	mv -f boxshade.1.new boxshade.1
   dh_installcatalogs
   dh_installcron
   dh_installdebconf
	install -o 0 -g 0 -d debian/boxshade/DEBIAN
   dh_installemacsen
   dh_installifupdown
   dh_installinfo
   dh_installinit
   dh_installmenu
	install -d debian/boxshade/usr/share/menu
	install -p -m644 debian/menu debian/boxshade/usr/share/menu/boxshade
	echo "# Automatically added by dh_installmenu">> debian/boxshade.postinst.debhelper
	sed "" /usr/share/debhelper/autoscripts/postinst-menu >> debian/boxshade.postinst.debhelper
	echo '# End automatically added section' >> debian/boxshade.postinst.debhelper
	echo "# Automatically added by dh_installmenu">> debian/boxshade.postrm.debhelper
	sed "" /usr/share/debhelper/autoscripts/postrm-menu >> debian/boxshade.postrm.debhelper
	echo '# End automatically added section' >> debian/boxshade.postrm.debhelper
   dh_installmime
   dh_installmodules
   dh_installlogcheck
   dh_installlogrotate
   dh_installpam
   dh_installppp
   dh_installudev
   dh_installwm
   dh_installxfonts
   dh_installgsettings
   dh_bugfiles
   dh_ucf
   dh_lintian
   dh_gconf
   dh_icons
   dh_perl
   dh_usrlocal
   dh_link
   dh_compress
	cd debian/boxshade
	chmod a-x usr/share/man/man1/boxshade.1 usr/share/doc/boxshade/changelog.Debian
	gzip -9nf usr/share/man/man1/boxshade.1 usr/share/doc/boxshade/changelog.Debian
	cd '/tmp/buildd/boxshade-3.3.1'
   dh_fixperms
	find debian/boxshade  -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0
	find debian/boxshade ! -type l  -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s
	find debian/boxshade/usr/share/doc -type f  ! -regex 'debian/boxshade/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 644
	find debian/boxshade/usr/share/doc -type d  -print0 2>/dev/null | xargs -0r chmod 755
	find debian/boxshade/usr/share/man debian/boxshade/usr/man/ debian/boxshade/usr/X11*/man/ -type f  -print0 2>/dev/null | xargs -0r chmod 644
	find debian/boxshade -perm -5 -type f \( -name '*.so.*' -or -name '*.so' -or -name '*.la' -or -name '*.a' \)  -print0 2>/dev/null | xargs -0r chmod 644
	find debian/boxshade/usr/include -type f  -print0 2>/dev/null | xargs -0r chmod 644
	find debian/boxshade/usr/share/applications -type f  -print0 2>/dev/null | xargs -0r chmod 644
	find debian/boxshade -perm -5 -type f \( -name '*.cmxs' \)  -print0 2>/dev/null | xargs -0r chmod 644
	find debian/boxshade/usr/lib/perl5 debian/boxshade/usr/share/perl5 -type f -perm -5 -name '*.pm'  -print0 2>/dev/null | xargs -0r chmod a-X
	find debian/boxshade/usr/bin -type f  -print0 2>/dev/null | xargs -0r chmod a+x
	find debian/boxshade/usr/lib -type f -name '*.ali'  -print0 2>/dev/null | xargs -0r chmod uga-w
   dh_strip
	strip --remove-section=.comment --remove-section=.note debian/boxshade/usr/lib/boxshade/boxshade
   dh_makeshlibs
	rm -f debian/boxshade/DEBIAN/shlibs
   dh_shlibdeps
	dpkg-shlibdeps -Tdebian/boxshade.substvars debian/boxshade/usr/lib/boxshade/boxshade
   dh_installdeb
	printf '#!/bin/sh
set -e
' > debian/boxshade/DEBIAN/postinst
	cat debian/boxshade.postinst.debhelper >> debian/boxshade/DEBIAN/postinst
	chown 0:0 debian/boxshade/DEBIAN/postinst
	chmod 755 debian/boxshade/DEBIAN/postinst
	printf '#!/bin/sh
set -e
' > debian/boxshade/DEBIAN/postrm
	cat debian/boxshade.postrm.debhelper >> debian/boxshade/DEBIAN/postrm
	chown 0:0 debian/boxshade/DEBIAN/postrm
	chmod 755 debian/boxshade/DEBIAN/postrm
	find debian/boxshade/etc -type f -printf '/etc/%P
' >> debian/boxshade/DEBIAN/conffiles
	chmod 644 debian/boxshade/DEBIAN/conffiles
   dh_gencontrol
	echo misc:Depends= >> debian/boxshade.substvars
	dpkg-gencontrol -ldebian/changelog -Tdebian/boxshade.substvars -Pdebian/boxshade
	chmod 644 debian/boxshade/DEBIAN/control
	chown 0:0 debian/boxshade/DEBIAN/control
   dh_md5sums
	(cd debian/boxshade >/dev/null ; find . -type f ! -path "./etc/boxshade/box_pep.sim" ! -path "./etc/boxshade/clust160.sim" ! -path "./etc/boxshade/box_dna.grp" ! -path "./etc/boxshade/strong.grp" ! -path "./etc/boxshade/positive.grp" ! -path "./etc/boxshade/box_pep.par" ! -path "./etc/boxshade/box_pep.grp" ! -path "./etc/boxshade/box_dna.sim" ! -path "./etc/boxshade/strong.sim" ! -path "./etc/boxshade/box_dna.par" ! -path "./etc/boxshade/positive.sim" ! -path "./etc/boxshade/clust160.grp"  ! -regex './DEBIAN/.*' -printf '%P\0' | LC_ALL=C sort -z | xargs -r0 md5sum > DEBIAN/md5sums) >/dev/null
	chmod 644 debian/boxshade/DEBIAN/md5sums
	chown 0:0 debian/boxshade/DEBIAN/md5sums
   dh_builddeb
	dpkg-deb --build debian/boxshade ..
dpkg-deb: building package `boxshade' in `../boxshade_3.3.1-8~experimental1_amd64.deb'.
 dpkg-genchanges  >../boxshade_3.3.1-8~experimental1_amd64.changes
dpkg-genchanges: not including original source code in upload
 dpkg-source --after-build boxshade-3.3.1
dpkg-buildpackage: binary and diff upload (original source NOT included)
I: Copying back the cached apt archive contents
I: unmounting dev/pts filesystem
I: unmounting run/shm filesystem
I: unmounting proc filesystem
I: cleaning the build env 
I: removing directory /var/cache/pbuilder/build//17785 and its subdirectories
I: Current time: Tue Mar 26 12:43:06 CET 2013
I: pbuilder-time-stamp: 1364298186
Could not read the .changes file: /sw/debian-med/trunk/packages/boxshade/build-area/.
rm -rf /sw/debian-med/trunk/packages/boxshade/build-area/boxshade-3.3.1
